So after I setup the Z-axis I attempted to home the printer in pronterface. This sent the head into the mount for the glass in the corner of the bed.
So my question is this:
Is this normal, and if not, what have I done wrong?
When I attached the Y-Axis I centered the y-axis frame in the main frame of the printer. In other words, there is an equal amount of y-axis on either side of the frame.